This dataset provides Weather Research and Forecasting (WRF) Stochastic Time-Inverted Lagrangian Transport (STILT) particle trajectory data and footprint products for two receptors located in Boston, Massachusetts, USA, for July 2013 - December 2014. Meteorological fields from version 3.5.1 of the Weather Research and Forecasting model are used to drive STILT. STILT applies a Lagrangian particle dispersion model backwards in time from a measurement location (the "receptor" location), to create the adjoint of the transport model in the form of a "footprint" field. The footprint, with units of mixing ratio, quantifies the influence of upwind surface fluxes on CO2 and CH4 concentrations measured at the receptor and is computed by counting the number of particles in a surface-influenced volume and the time spent in that volume. Particle trajectories are provided for the two receptors at two temporal and spatial scales: three days of surface influence over the whole North American coverage area at 1-degree resolution and 24 hours of surface influence within a smaller region close to the measurement locations ('near field') at 0.1-degree resolution.