1 Citation
Heat stress at Uva Island during the 1982-83, 1997-98 and 2015-16 ENSOs Description: This repository obtains and analyzes SST data for Uva Island reef to compare the intensity of heat stress during the past three major ENSOs. Content: A.Temperature_DHW.Rmd: This script uses the temperature data in the B.Temperature_data folder to calculate the accumulated heat stress (DHW) at Uva Island reef, based on three different temperature data sources (OISST, CRW and In situ sensors). Figures resulting from running the script are saved in the C.Outputs folder. B.Temperature_data: Directory containing data files in .csv format with the temperature data for Uva Island reef from different sources B.Temperature_data/Uva_CRW_MMM_1985-2012.csv: Coral Reef Watch MMM (5km products v3.1) for the closest pixel to Uva Island reef B.Temperature_data/Uva_Daily_CRW_5km_1985-2016.csv: Coral Reef Watch SST data (5km products v3.1) for the closest pixel to Uva Island reef B.Temperature_data/Uva_Daily_InSitu_1997-2018.csv: In situ temperature data obtained from 1997-2018 at Uva Island reef ("Gardineroseris city') ~ 3m depth B.Temperature_data/Uva_Daily_OISST_1982-2016.csv: Optimal Interpolation SST data (V2) for the closest pixel to Uva Island reef B.Temperature_data/BanderasBay_Daily_OISST_1982-2016.csv: Optimal Interpolation SST data (V2) for the closest pixel to Uva Island reef C.Outputs: Directory containing figure files related with temperature and DHW included on the paper. Figure 1a and 3a Figure S6 Figure S7 Figure S8 Figure S9 Figure S5b D.SST_nc: Directory containing scripts used to download and extract OISST and CRW SST data from .nc files. You do not have to run the code in the D.SST_nc folder to produce the data analysis in the paper (this can be achieved by running A.Temperature_DHW.Rmd using the temperature data already provided in B.Temperature_data). However, you could use these scripts to retrieve and extract the SST data by yourself.The outputs of these scripts are already included in B.Temperature_data/Uva_CRW_MMM_1985-2012.csv:, B.Temperature_data/Uva_Daily_CRW_5km_1985-2016.csv" and B.Temperature_data/Uva_Daily_OISST_1982-2016.csv. By running the scripts inside this folder you will create tho...